The OpenEXR Python Module¶
The OpenEXR python module provides basic access to data in EXR image files. The read and write methods use python dictionaries for header metadata and numpy arrays for pixel data.
To install the OpenEXR module:
% pip install OpenEXR
The module is specifically designed for maximum simplicity and ease of use, not for high performance. If your application deals with especially large data files, is particular about memory management, or needs low level operations like reading specific scanlines or tiles, this may not be the module for you. But if your application is comfortable reading entire files into memory and can deal with pixel data in numpy arrays, the OpenEXR module is a suitable option.
A Note about Backwards Compatibility¶
The v3.3 release of the OpenEXR module provides an entirely new API in
the form of the OpenEXR.File
object. This API is full-featured and
fully supported going forward.
The original implementation of the OpenEXR python bindings prior to
the v3.3 release used the InputFile
and OutputFile
objects. This API is limited in scope, and is now deprecated. It is
still distributed as is for backwards compatibility, but usage is
discouraged.
Example Images¶
See Test Images for example images to experiment with.
Reading and Writing in a Nutshell¶
Generate random RGB data and write it to an EXR file:
import OpenEXR
height, width = (1080, 1920)
RGB = np.random.rand(height, width, 3).astype('float32')
channels = { "RGB" : RGB }
header = { "compression" : OpenEXR.ZIP_COMPRESSION,
"type" : OpenEXR.scanlineimage }
with OpenEXR.File(header, channels) as outfile:
outfile.write("image.exr")
This creates a scanline image of size 10x20 pixels with R, G, and B
channels of type float, initialized to random values, and writes it to
the file test.exr
, compressed with ZIP compression.
Correspondingly, to read an image and print its pixel data:
import OpenEXR
with OpenEXR.File("image.exr") as infile:
header = infile.header()
print(f"type={header['type']}")
print(f"compression={header['compression']}")
RGB = infile.channels()["RGB"].pixels
height, width = RGB.shape[0:2]
for y in range(height):
for x in range(width):
pixel = (RGB[y, x, 0], RGB[y, x, 1], RGB[y, x, 2])
print(f"pixel[{y}][{x}]={pixel}")
Reading EXR Files with OpenEXR.File¶
The basic construct of the OpenEXR module is the File
object.
Construct a File
object with a filename as the parameter and it
reads the image data into the object:
>>> exrfile = OpenEXR.File("StillLife.exr")
OpenEXR.Part¶
An EXR file consists of a list called parts
of one or more parts,
which the OpenEXR python module represents with the Part
object. A
part consists of a dictionary called header
that holds the
attribute metadata, and a dictionary called channels
that hold the
pixel data.
>>> exrfile = OpenEXR.File("StillLife.exr")
>>> part = exrfile.parts[0]
>>> part.height()
846
>>> part.width()
1240
>>> for name,value in part.header.items():
... print(name, value)
...
capDate 2002:06:23 21:30:10
channels [Channel("A", xSampling=1, ySampling=1), Channel("B", xSampling=1, ySampling=1), Channel("G", xSampling=1, ySampling=1), Channel("R", xSampling=1, ySampling=1)]
compression Compression.PIZ_COMPRESSION
dataWindow (array([0, 0], dtype=int32), array([1239, 845], dtype=int32))
displayWindow (array([0, 0], dtype=int32), array([1239, 845], dtype=int32))
lineOrder LineOrder.INCREASING_Y
owner Copyright 2002 Industrial Light & Magic
pixelAspectRatio 1.0
preview PreviewImage(100, 68)
screenWindowCenter [0. 0.]
screenWindowWidth 0.44999998807907104
type Storage.scanlineimage
utcOffset 25200.0
>>> for name,channel in part.channels.items():
... print(name, channel, channel.pixels.shape, channel.pixels.dtype)
...
RGBA Channel("RGBA", xSampling=1, ySampling=1) (846, 1240, 4) float16
Since many common EXR files have only a single part, for convenience,
the File
object has header()
and channels()
methods that
Header Metadata¶
The File
object’s header()
method returns a dictionary holding
the file’s metadata. The dictionary key is the metadata attribute
name, and the dictionary value is an object holding the attribute value.
An EXR file header can store metadata attributes with any name, but see Standard Attributes for a complete description of the standard attributes in an EXR file, both required and optional, which have strictly enforced types.
Supported types of metadata are:
string
list of strings
integer
float
list of floats
V2i, V2f, V2d, V3i, V3f, V3d - 2D and 3D vectors, represented as 2x1 or 3x1 numpy arrays with a
dtype
ofint32
,float32
, orfloat64
.M33f, M33d, M44f, M44d - 3x3 or 4x4 matrices, represented as 3x3 or 4x4 numpy arrays with a
dtype
offloat32
orfloat64
.Box2i, Box2f - bounding boxes, represented as tuples of numpy arrays (
min
andmax
) with adtype
ofint32
orfloat32
.
The OpenEXR module has enumerated types for certain attributes:
The dataWindow
Attribute and Image Size¶
The dataWindow
attribute is especially important. Its size matches
the shape of the channel pixel arrays. The min
of the
dataWindow
attribute specifies the row/column coordinate of the
pixel at the origin of the image. However, the numpy arrays holding
the pixel data are not offset by this value.
>>> min,max = exrfile.header()["dataWindow"]
>>> height = max[1] - min[1] + 1
>>> width = max[0] - min[0] + 1
>>> height,width
(846, 1240)
OpenEXR.Channel¶
The channels()
method of the File
object returns a dictionary
holding pixel data. The key is the channel name and the value is a
Channel
object.
The Channel
object has a pixels
field that is a 2D numpy array
holding the pixel data. Supported types are uint32
, float16
,
and float32
.
For parts that contain RGB data, where the file contains separate
R
, G
, B
, and optionally A
channels, the channels
dictionary holds a single channel named RGB
and with a numpy array
of shape (height, width, 3)
, or RGBA
and a numpy array of
shape (height, width, 4)
if there is alpha.
All channels within a part have the same width and height, and thus the same pixel array shape.
For single-part files, channels()
returns the image channels for the
file. For multi-part files, channels()
takes a part number as
argument and returns the channels for that part:
>>> for p in range(len(exrfile.parts)):
... for name,channel in exrfile.channels(p).items():
... print(name, channel.pixels.shape, channel.pixels.dtype)
...
RGBA (846, 1240, 4) float16
The channel object also has xSampling
, ySampling
, and
pLinear
fields that hold the channel’s subsampling values and
plinear setting used for DWA compression. The default sampling values
are 1 and are only used for luminance subsampling.
Pixel Arrays¶
The first dimension of a channel’s pixels
array is the image
height. The second dimension is the image width. All channels of a
part must have the same width and height. It’s an error to create or
write a File object with channels of different shapes. The Part
object has height()
and width()
methods that return the image
dimension. You can, of course, query the dimension of a channel via
the pixel array itself.
>>> part = exrfile.parts[0]
>>> dw = part.header['dataWindow']
>>> height = part.height()
>>> width = part.width()
>>> for name,channel in part.channels.items():
... print(name, channel.pixels.shape, height, width, dw)
...
(846, 1240, 4) 846 1240 (array([0, 0], dtype=int32), array([1239, 845], dtype=int32))
The File
object allocates space for the pixel arrays upon
read. There is no mechanism to provide memory addresses for the pixel
arrays.
Pixel Array Data Layout¶
Although the OpenEXR file format supports channels of arbitrary name
and number of type uint32
, float16
, and float32
, most
programs working with OpenEXR files expect this data to represent
pixels, so it’s more convenient to group R
, G
, B
, and
A
channels together. By default, the File
object does this and
returns a channel with name RGB
and a numpy array of shape
(height, width, 3)
, or RGBA
and a numpy array of shape
(height, width, 4)
if there is alpha.
The File()
object constructor takes an optional
separate_channels
argument, False
by default, but if True
,
it skips the channel grouping and returns each channel as a separate
2D numpy array.
Tiled Images¶
The File
object reads tiled EXR images into pixel arrays just the
same as scanline images.
Although the EXR format supports multiple tile levels, currently, the API provides no access to these levels.
Deep Images¶
Deep EXR files store an arbitrary number of data values per pixel. For
deep parts, the Channel
object’s pixels
array has a dtype
of object
, which is in turn a 1D numpy array holding the deep samples
for that pixel. Supported types for the deep sample array are
uint32
, float16
, and float32
.
If the deep sample array object for a given pixel is None
, there
are no samples for that pixel.
RGB = infile.channels()["RGB"].pixels
height, width = R.shape
for y in range(height):
for x in range(width):
if R[y,x].dtype == None:
print(f"No samples for pixel {y},{x}")
else:
for i in range(RGB[y,x].shape(0)):
print(f"pixel {y},{x} sample[{i}]: {RGB[y,x]}")
All channel within a given deep part must have the same number of samples, so the deep sample arrays for all channels have the same size and shape.
Writing EXR Files with OpenEXR.File¶
To write an EXR file, construct a File
object and call the
write()
method.
For single-part files, the File
object constructor takes a
dictionary for the header and a dictionary for the channels.
Construct the channels dict with values that are either numpy arrays
or Channel
objects if you need to specify the xSampling
,
ySampling
, or pLinear
values.
The channel pixel arrays must have a dtype
of uint32
,
float16
, or float32
.
All channel pixel arrays within a given part must have the same
dimenions. The write
method will throw an exception if they are
not.
height, width = (20, 10)
RGB = np.random.rand(height, width, 3).astype('f')
channels = { "RGB" : RGB }
header = { "compression" : OpenEXR.ZIP_COMPRESSION,
"type" : OpenEXR.scanlineimage }
with OpenEXR.File(header, channels) as outfile:
outfile.write("test.exr")
Writing Multi-Part EXR Files¶
For multi-part images, pass the File
constructor a list of
Part
objects, each of which holds the header and channels dicts.
height, width = (20, 10)
Z0 = np.zeros((height, width), dtype='float32')
Z1 = np.ones((height, width), dtype='ffloat32')
P0 = OpenEXR.Part({}, {"Z" : Z0 })
P1 = OpenEXR.Part({}, {"Z" : Z1 })
f = OpenEXR.File([P0, P1])
f.write("readme_2part.exr")
with OpenEXR.File("multipart.exr") as o:
assert o.parts[0].name() == "Part0"
assert o.parts[0].width() == 10
assert o.parts[0].height() == 20
assert o.parts[1].name() == "Part1"
assert o.parts[1].width() == 10
assert o.parts[1].height() == 20
Writing Tiled EXR Files¶
To write a tiled image, set the type
header attribute to
OpenEXR.tiledimage
and the tiles
header attribute to an object
of type OpenEXR.TileDescription
with the appropriate settings.
height, width = (20, 10)
Z = np.zeros((height, width), dtype='f')
channels = { "Z" : Z }
header = { "type" : OpenEXR.tiledimage,
"tiles" : OpenEXR.TileDescription(),
"compression" : OpenEXR.ZIPSCOMPRESSION }
with OpenEXR.File(channels, header) as exrfile:
exrfile.write("tiled.exr")
Writing Deep EXR Files¶
For deep images, the channel pixel arrays must have a dtype
of
object
, or None
for pixels with no samples. The object must
be a numpy array with a dtype
of uint32
, float16
, or
float32
.
height, width = (20, 10)
Z = np.empty((height, width), dtype=object)
for y in range(height):
for x in range(width):
Z[y, x] = np.array([y*width+x], dtype='float32')
channels = { "Z" : Z }
header = { "compression" : OpenEXR.ZIPS_COMPRESSION,
"type" : OpenEXR.deepscanline }
with OpenEXR.File(header, channels) as outfile:
outfile.write("deep.exr")
All deep pixel arrays within a given part must have the same number of
samples, so the pixel arrays must have the same size and shape. The
write
method will throw an exception if they are not.